If you have your Portfolio setup as Category based as opposed to the default Gallery based setup.. then the order of the galleries on your Live Site will now be determined by the way you have them sorted within the Categories section of your admin interface..
So if you head to the Library / Gallery Categories page of your admin account (as opposed to the Library / Galleries page).. then you should be able to
Drag and Drop your galleries into the desired order from there..
Hope this helps!
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